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How Do You Manage Risks in Complex Business Structures in Australia?

Summary

  • Operating through multiple entities increases governance, tax, and compliance obligations, and failure to maintain strict separation between entities can expose directors to personal liability and weaken asset protection.
  • Transactions between related entities, such as management fees, loans, and intellectual property licences, must be documented in writing and priced at arm’s length to withstand regulatory scrutiny and avoid tax reassessments.
  • Each entity in a group structure has its own compliance obligations, and managing compliance at a group level without tracking individual entity requirements risks missed deadlines, licence failures, and regulatory investigation.
  • This article explains the governance, financial, and compliance risks of complex business structures for business owners operating multiple entities in Australia.
  • LegalVision, a commercial law firm specialising in advising clients on corporate governance and business structuring, outlines the key risks and practical steps to protect your structure.

Tips for Businesses

Maintain separate bank accounts, board minutes, and registers for each entity. Document all inter-company transactions in written agreements with arm’s length pricing. Review your structure regularly with legal and tax advisers to identify weaknesses before they attract regulatory scrutiny or create liability.

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If you operate through multiple entities, you must actively manage governance, financial and compliance risk across your structure. Complex business structures can protect assets, improve tax outcomes and support growth. However, if you fail to maintain proper separation and documentation, you expose your business to regulatory scrutiny, tax reassessments, personal liability and loss of asset protection.

This article explains the key risks and the practical steps you should take to protect your structure.

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What is a Complex Business Structure?

You operate a complex structure when your business uses multiple legal entities to achieve its business goals. These commonly include holding companies or parent companies that own other companies (subsidiaries), trusts, joint ventures and companies set for a specific purpose.

For example, you may operate a property development group where a holding company owns subsidiaries for land purchases, construction and property management. You may also use a trust that facilitates investor participation.

While this structure can protect your business, it also increases compliance and governance obligations. If you fail to treat each entity as legally separate, you weaken the protection the structure is designed to provide.

Governance Risks in Multi-Entity Groups

If you act as a director across multiple entities, you must consider each company’s interests independently.

Risk arises when you:

  • blur decision-making between entities;
  • fail to identify conflicts of interest; and
  • record decisions at the group level instead of the entity level.

If a subsidiary’s interests are different from those of the parent company and you do not manage that conflict properly, you risk breaching your duties and exposing yourself to personal liability.

You should hold separate board meetings, maintain entity-specific minutes and document how you considered each company’s interests. Proper documentation protects you in disputes and investigations.

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Regulators carefully examine transactions between your companies.

If your holding company charges management fees, provides loans or licenses intellectual property to subsidiaries, you must ensure the terms are fair and reflect current rates. If you cannot explain pricing or document transactions properly, regulators may audit you, impose penalties and damage your reputation.

You must maintain:

  • written inter-entity agreements;
  • clear loan and service documentation; and
  • separate financial records for each entity.

Poor record-keeping weakens your position if regulators review your structure.

Regulatory and Compliance Gaps

Each entity in  your structure may have different compliance obligations. If you manage compliance at a group level without tracking the obligations of each entity, you may miss important obligations.

As a result, you may miss reporting deadlines, fail to update licence records and apply inconsistent governance standards across entities.

You should implement a clear central system to track obligations, renewal dates and reporting requirements for each entity. Without this oversight over your businesses, regulators may investigate the broader group.

Protecting Asset Separation and Limiting Liability

Your structure only protects you if you maintain strict separation between entities.

If you mix bank accounts, use subsidiary assets interchangeably or fail to follow formal approval processes, courts may disregard your separate entities.

Therefore, you must maintain separate bank accounts, document all inter-company payments and follow proper board processes. If you ignore these formalities, problems in one company can affect the other and weaken your asset protection strategy.

Implementing a Strong Governance Framework

You should treat governance as an important part of managing risk in your business.

Your governance framework should clearly define roles, reporting lines and decision-making authority across your group. You should also maintain director registers, conflict registers and risk registers at both entity and group level.

You should review your governance regularly to ensure your structure remains fit for purpose and aligned with your business goals.

Record-Keeping as a Risk Management Tool

Strong records protect your business during audits, disputes and regulatory investigations.

For each entity, you should maintain incorporation documents, registers, board minutes and all agreements between your entities. If one company issues shares or takes out a loan, you must record approvals and update registers accordingly.

If your records are incomplete or inconsistent, you may struggle to prove your position and protect your business.

Ongoing Review and Professional Oversight

You should review your business structures regularly.

Regularly assess whether internal agreements are commercially appropriate, whether pricing reflects market conditions and whether any entity creates unnecessary risk or cost.

You should also engage experienced legal and tax advisers to identify structural weaknesses before they become disputes.

Key Statistics

  1. 5.9 per cent: Large corporate groups recorded a 5.9 per cent income tax gap in 2022-23, equating to $6 billion in non-compliance often linked to complex structures.
  2. $104.1 million: ASIC imposed $104.1 million in penalties in 2024-25 for governance and compliance breaches involving complex business structures.
  3. 42 per cent: 42 per cent of ACNC compliance investigations in 2024-25 involved misuse of complex corporate structures to obscure control or avoid obligations.

Sources

  1. Australian Taxation Office (ATO) – Key compliance risks for large corporate groups (November 2025)
  2. Australian Securities and Investments Commission (ASIC) – Corporate Plan 2025-26 (August 2025)
  3. Australian Charities and Not-for-profits Commission (ACNC) – 2024-25 Compliance Focus: Misuse of complex corporate structures (September 2024)

Key Takeaways

Complex business structures increase governance, tax and regulatory risk. To protect your business, you must treat each company as legally separate in your decision-making and record-keeping. If you keep poor or incomplete records, you weaken your asset protection and expose yourself to liability. Regular review and professional advice are essential to ensure your structure remains compliant, effective and properly protected.

LegalVision provides ongoing legal support for businesses through our fixed-fee legal membership. Our experienced business lawyers help businesses manage contracts, employment law, disputes, intellectual property, and more, with unlimited access to specialist lawyers for a fixed monthly fee. To learn more about LegalVision’s legal membership, call 1300 544 755 or visit our membership page.

Frequently asked questions

What is a holding company and how can it help protect my business?

A holding company is a company set up to own the shares of other companies. It can separate valuable assets from trading risk by holding them in a separate structure, helping protect those assets if an operating company faces liability or financial difficulties. 

How do I manage multiple businesses under one structure?

You can operate multiple businesses through a holding company that owns subsidiaries. This setup can offer legal protection and make control easier. However, it increases compliance and administrative tasks, so you should ensure each company meets its legal obligations and keeps proper records.

What happens if you fail to maintain separation between entities in a complex structure?

Courts may disregard your separate entities entirely if you mix bank accounts, use subsidiary assets interchangeably, or fail to follow formal approval processes. This can expose assets across your entire structure to liability, undermining the protection your structure was designed to provide.

Why must inter-entity transactions be properly documented and priced at market rates?

Regulators closely scrutinise transactions between related entities, such as management fees, loans, and intellectual property licences. If you cannot justify pricing or provide proper documentation, you risk audits, penalties, and reputational damage, making written inter-entity agreements and separate financial records essential.

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Holly Flynn

Holly is a Law Graduate in LegalVision’s Corporate team. She assists a broad range of diverse clients regarding business structuring and company incorporations.

Qualifications:  Bachelor of Laws, Macquarie University.

Read all articles by Holly

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